BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E08SP1|AL426380
(773 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1456 0.0
>3x_Contig1713
Length = 18539
Score = 1456 bits (731), Expect = 0.0
Identities = 757/770 (98%)
Strand = Plus / Minus
Query: 4 cttgaatttaatatcattcacatccacatttttcgattgctgtttgtaatagtttattat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3300 cttgaatttaatatcattcacatccacatttttcgattgctgtttgtaatagtttattat 3241
Query: 64 atcaaagataggagttgaagagacagacaaccctgtdatatcaacgtacaacccagaatc 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3240 atcaaagataggagttgaagagacagacaaccctgtaatatcaacgtacaacccagaatc 3181
Query: 124 aaggtcgatgaatcttgcatcaatattgttaaacccgttcccgttaactcttgtagttat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3180 aaggtcgatgaatcttgcatcaatattgttaaacccgttcccgttaactcttgtagtaat 3121
Query: 184 ggaactactaacatcaatcaaaaatttaccattcccctctgatggatcctcaagcactac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3120 ggaactactaacatcaatcaaaaatttaccattcccctctgatggatcctcaagcactac 3061
Query: 244 cgtttggttganatgctgtgccaatagattcaagtgtttgataggcatctgcatatctgc 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3060 cgtttggttgaaatgctgtgccaatagattcaagtgtttgataggcatctgcatatctgc 3001
Query: 304 vtcgttatcccaagggaatgtccttccgttgtacatccatccgtacatagtaccatgagc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3000 atcgttatcccaagggaatgtccttccgttgtacatccatccgtacatagtaccatgagc 2941
Query: 364 caaccaagaaattaatccattagcctttacgaatttttggtagtttctgattaaagaatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2940 caaccaagaaattaatccattagcctttacgaatttttggtagtttctgattaaagaatc 2881
Query: 424 cmacctcatttccatttggraagggtctgcgataagaggtccattgaagaaccgtttatc 483
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2880 caacctcatttccatttggaaagggtctgcgataagaggtccattgaagaaccgtttatc 2821
Query: 484 gaaatggttaccgtatttcttgaacgactgarcatgagatgattcaaggaaatactttgg 543
||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 2820 gaaatggttaccgaattacttgaacgactgaacatgagatgattcaaggaaatactttag 2761
Query: 544 tgcaaacgcataatggaaagargtggaaaacttcaaagagtccaaatacgatttttcatg 603
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2760 tgcaaacgcataatggaaagaagtggaaaacttcaaagagtccaaatacgatttttcatg 2701
Query: 604 tggtgttagatcatcggaacgagcctctcactctttcatcttcgccatggcatcgaattc 663
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 2700 tggtgttagatcatcggaacgagcctctaactctttaatcttcgccatggcatcgaattc 2641
Query: 664 gaagtcattctcgttcaatacaacgtacggcatagaatcatcggattggcgttgtttatt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 gaagtcattctcgttcaatacaacgtacggcatagaatcatcggattggcgttgtttatt 2581
Query: 724 tgcaataatctcatcgatgaccaccttgtgttcttttgcactatccgatt 773
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 tgcaataatctcatcgatgaccaccttgtgttcttttgcactatccgatt 2531
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5530
Number of Sequences: 1807
Number of extensions: 5530
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 773
length of database: 10,358,551
effective HSP length: 16
effective length of query: 757
effective length of database: 10,329,639
effective search space: 7819536723
effective search space used: 7819536723
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)